Copy Number/LOH Control Set Adjustment

Running this process for the GeneticMarkerExample sample setting generates two output data sets accessed from a Results window shown below. Refer to the Copy Number/LOH Control Set Adjustment process description for more information about this process.

The Results window contains the following panes:

Output Data

This process generates the following output data set:

•	Output Data Set: The output data set contains the copy number intensity/count adjusted data generated by subtraction of control sample intensities/counts, from experimental samples

•	Output Experimental Design Data Set (EDDS): This data set is generated from the input EDDS and provides information about the columns in the input data set. In this example, the rows representing the control sets were removed.

•	For detailed information about the files and data sets used or created by JMP Life Sciences software, see Files and Data Sets.

General

•	Click Reopen Dialog to reopen the completed process dialog used to generate this output.

•	Click Close All to close all graphics windows and underlying data sets associated with the output.