Code genotypes numerically

Check this box to code the SNP genotypes numerically.

Encoding is performed as follows, according to the allele frequencies in the Annotation SAS Data Set:

Code

Meaning

0

Homozygous for the major allele

1

Heterozygous

2

Homozygous for the minor allele

Note: The Annotation SAS Data Set must contain the variable Allele_Frequencies.

To Code Genotypes Numerically:

8 Check the box.