Annotation Analysis

Determining the statistical significance of one or more genes in a process is only the first step in developing your understanding of the role those genes play in an organism. Of equal, or perhaps even greater, importance is placing those genes in a biological context. What proteins do those genes encode? What biological functions do they provide? What other genes do they interact with?

The Annotation Analysis category menu provides a set of bioinformatic tools, all grouped under five different submenus that can help you incorporate biological meaning with your statistical results.

Subcategory	Contains processes for...
General	Non-vendor-specific analyses for gene set enrichment and scoring, and annotation report generation
Affymetrix	Affymetrix-specific browser, download, and file conversion tools
Ingenuity	Ingenuity-specific tools for contextual analysis and gene pathway retrieval
GSEA / MSigDB	Merging and exporting files for use in MSigDB or GSEA

See the The JMP Genomics Starter main page for other process categories.