Output | Expression | Correlation and Grouped Scatterplots
Correlation and Grouped Scatterplots
Running this process for the DrosophilaAgingExample sample setting generates the tabbed Results window shown below. Refer to the Correlation and Grouped Scatterplots process description for more information. Output from the process is organized into tabs. Each tab contains one or more plots, data panels, data filters, and so on, that facilitate your analysis.
The Results window contains the following panes:
Tab Viewer
This pane provides you with a space to view individual tabs within the Results window. Use the tabs to access and view the output plots and associated data sets.
The following tabs are generated by this process:
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Grouped Correlation : This tab shows a Scatterplot Matrix for each experimental group.
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Summary : This tab contains box plots , quantiles , and summary statistics for all experimental groups.
Drill Downs
Action buttons provide you with an easy way to drill down into your data.
The following action buttons are generated by this process:
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IPA Upload : Select points or rows and click IPA Upload to open the IPA Upload process with the selected points specified as input data.
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UCSC Genome Browser : Select points or rows and click UCSC Genome Browser to open the UCSC Genome Browser process with the selected points specified as input data.
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Annotation Summary : Select points or rows and click Annotation Summary to summarize annotation information for the selected genes or markers
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GO Stat : Select points or rows and click GO Stat to access, annotate, and analyze information for selected molecular entities in the Gene Ontology database.
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Onto-Express : Select points or rows and click Onto-Express to retrieve annotation information for selected gene or markers from the Onto-Express database
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GenBank Nucleotide : Select points or rows and click GenBank Nucleotide to opens a browser window directed to a GenBank Nucleotide search for the selected molecular entities.
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UniGene Database : Select points or rows and click UniGene Database to open a browser window directed to a UniGene Database search for the selected molecular entities.
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AceView Database : Select points or rows and click AceView Database to access information from the ACEView database for selected genes or markers.
General
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Click View Data to surface the data sets corresponding to the active tab.
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Click Reopen Dialog to reopen the completed process dialog used to generate this output.
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Click Create Report to generate a pdf - or rtf -formatted report containing the plots and charts of selected tabs.
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Click Close All to close all graphics windows and underlying data sets associated with the output.