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When using the
Input Data Set
, you must specify a color theme and
bin
method below. Bins are created along the
genome
and the
variables
that you specified on the
General
tab are averaged within bins and across each other to create a single continuous
color variable
named
Avg_ContVar
(or
Avg_NLP
for the average of -log
10
p-values
if variables contain
p
-values) in the output text file.
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When using a
settings file
, you must first create it using the
Chromosome Color Theme
process, save the setting, and then select it in the fields below.
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If the field is not already active, select
Chromosome Color Plot
for the
Display output as a:
option.
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