The
Genotype Color Plots
tab is shown below:
Note
: This tab is shown only when a
Genotype Data Set
is specified and the
Display marker genotype cell color plots
option is checked.
The
Genotype Color Plots
tab contains the following elements:
Each genotype color plot shows a visual representation of the input genotype data set for each
linkage
group with markers along the top in the order as computed by the process. Each row corresponds to a line/sample in the genotype data set. Genotypes are consistently colored red to represent homozygosity for Parental Line 1, gray to represent
heterozygous
genotypes, and blue for lines that are
homozygous
for Parental Line 2. Depending on the cross type, you might see all colors or only a subset (for example, a backcross to parental line 1 should show only red and gray colors).