Use this text box to specify a percentage cut-off for removing SNPs from the output data set. Those SNPs whose percentage of samples falling below the specified cut-off(s) is greater than or equal to the percentage entered here, are dropped from the output.
This option can be used along with Drop SNPs with this percentage of samples that are below: option to remove SNPs from the output data sets that do not meet the cut-off(s) specified in the Cut-off for GQ field or the Cut-off for GQ field.
