The Track Gene Web process creates a settings (
.sas) file that defines a display track for a set of genes to be added to JMP Genomics statistical results (for example, you can include plots of -log
10(
p-values) along
chromosome). The resulting
settings file can then be selected as a
track file for embellishing graphics with depictions of genes.
Running the Track Gene Text process results in the generation of a setting file (for example,
TrackGeneWeb__UCSC_hg19_refGene.sas), whose path is displayed in a
JMP Genomics Message window.
Important: The settings file contains the
path to the text file defining the track. If the text file is moved into another directory, you must either run
Track Gene Text to define a setting with its new location, or edit the path in the settings file to reflect the new location.