Output Description

PLINK Binary Input Engine

Running this process using the SNP984_Sample1000 sample setting generates the Results window shown below. Refer to the PLINK Input Engine process description for more information.

The Results window contains the following elements:

Output Data

This process generates the following data sets:

•

Genotype Data Set: This wide data set lists genotype for each marker. Alternatively, for markers for which no genotype's probability meets the specified threshold, a missing value symbol (.) is listed.

•

Map Data Set: This data set lists map data and other information for each of the SNPs in the study. Note: The SNPs are listed in rows in this data set.

Note: You can view the data in a file or data set by clicking either Open or View Subset (when the data set is very large).

Launch Follow-up Processes

•

Basic Genetics Workflow: Click Basic Genetics Workflow to launch the Basic Genetics Workflow process with the output data sets specified as input.

General

•

Click Reopen Dialog to reopen the completed process dialog used to generate this output.

•

Click Close All to close all graphics windows and underlying data sets associated with the output.