Summary Chart (Multiple SNP-Trait Association)

The Summary Chart tab (shown below) gives an overview of the counts of significant genes for each test in each annotation plotting group.

The Summary Chart tab contains the following elements:

•

One or more Summary Charts.

The summary chart gives an overview of the counts of significant genes (or other type of annotation analysis group) for each test in each plotting group. This tab is generated when there are multiple annotation plotting groups. There is a separate set of bars for each annotation plotting group, with individual bars for each test performed and a legend showing the color used for each test if there is more than one.

If any BY variables were selected, a separate chart is displayed for each BY group.

This chart can be used to determine what Annotation Plotting Group Results tab to open and further explore, particularly when a large number of genes were tested.