Process Description

CLC Bio Input Engine

This process imports CLC Bio SNP or DIP Detection Table .csv files for different samples into a single tall SAS data set, with separate output data sets per chromosome if there are more than one million loci. Additional wide SAS data sets can be requested.

Note: This process is considered experimental.

What do I need?

You must specify one or more CLC bio SNP or DIP Detection Table comma-separated value (.csv) files as Files to Import. An example of such a file is the s_2_sequence(pt24) mapping (25 references) DIP Detection Table.csv file, shown below.

In this example, three .csv files have been specified.

For detailed information about the files and data sets used or created by JMP Genomics software, see Files and Data Sets.

Output/Results

The output data sets generated by this process are listed in a Results window. Refer to the CLC Bio Input Engine output documentation for detailed descriptions.