Process Description

Complete Genomics Input Engine

This process imports various Complete Genomics files from the ASM directory and combines similar files from different samples into a single tall SAS data set per chromosome. Additional wide SAS data sets can be requested.

Important: .bz2 files must be unzipped before running this input engine.

Note: This process is considered experimental.

What do I need?

A Folder of Complete Genomics Files must be specified (typically an ASM directory). An example folder is shown below.

For detailed information about the files and data sets used or created by JMP Genomics software, see Files and Data Sets.

Output/Results

The output data sets generated by this process are listed in a Results window. Refer to the Complete Genomics Input Engine output documentation for detailed descriptions.