Genome Views -log10(p-value) Cutoff Additional Bandwidth on Each Side of Tracks Alpha Annotation Merge Variables Annotation SAS Data Set Annotation Variables to Keep Bin Method Bin Summary Statistic Chromosome Chromosome Color Theme Settings File Chromosome Text Data Set Chromosome Text File Chromosome Variable Chromosome Variable 1 Chromosome Variable 2 Circular Display Coding Region End Coding Region Start Color of Bars ({r,g,b}) Color Theme Color Variable Color Variable Type Construct Color Theme using: Continuous Variables to Plot Create separate plots for each variable Custom Track Variable Description Direction of Other Variables Display output as a: Draw indicator line End Exon Count Exon Ends Exon Starts Filter to Include Annotation Rows Filter to Include Observations Folder of Chromosome Color Theme Settings Files Folder of Track Settings Files GenBank Accession Variable Gene Description Variable Gene Name or Identifier Gene or LocusLink ID Variable Gene Symbol Variable Genome Initial Color Theme Initial Cutoff for Displaying Bars Input GFF File Input SAS Data Set Label for Other Variables Label Label Variable Lightness Scale Links Color Theme Links Color Variable Links Input SAS Data Set Multiple Testing Method Name Number of Legend Decimals Number of Legend Levels Number of Rows in Each Bin Organism Output Data Set Output Folder Plot bars Plot markers with significant p-values only Position Position Variable Position Variable 1 Start Position Variable 1 Stop Position Variable 2 Start Position Variable 2 Stop Primary Color Reverse Color Theme Saturation Scale Search Type Secondary Color Server Output Directory Set window size SNP ID Variable Start Strand Study Summary Statistic Across Continuous Variables Text Data Set Text File Threshold Indicator Title of Custom Track Track Settings Files Transformation of Input p-Values Transformation of Output p-Values Transparency Two Column Threshold Type of Continuous Variables to Plot Value at Which to Censor High Values Value at Which to Censor Low Values Value Ordering for Nominal Variables Values at Which to Draw Horizontal Reference Lines Variables By Which to Merge Annotation Data Variables to Keep in HTML Data Set Variables to Retain in HTML Data Set Width of Bars Width of Positional Bin Window Size y Variable y Variables